CDS

Accession Number TCMCG007C12007
gbkey CDS
Protein Id XP_033140246.1
Location complement(join(5765788..5766459,5766547..5766783,5766863..5766974,5767062..5767378,5767462..5767674,5767756..5768341,5768429..5768509,5768672..5768703))
Gene LOC103851674
GeneID 103851674
Organism Brassica rapa

Protein

Length 749aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033284355.1
Definition probable cyclic nucleotide-gated ion channel 5 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category P
Description cyclic nucleotide-gated ion channel
KEGG_TC 1.A.1.5
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04040        [VIEW IN KEGG]
KEGG_ko ko:K05391        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04626        [VIEW IN KEGG]
map04626        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005216        [VIEW IN EMBL-EBI]
GO:0005217        [VIEW IN EMBL-EBI]
GO:0005221        [VIEW IN EMBL-EBI]
GO:0005223        [VIEW IN EMBL-EBI]
GO:0005244        [VIEW IN EMBL-EBI]
GO:0005249        [VIEW IN EMBL-EBI]
GO:0005261        [VIEW IN EMBL-EBI]
GO:0005262        [VIEW IN EMBL-EBI]
GO:0005267        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006812        [VIEW IN EMBL-EBI]
GO:0006813        [VIEW IN EMBL-EBI]
GO:0006816        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008324        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015075        [VIEW IN EMBL-EBI]
GO:0015077        [VIEW IN EMBL-EBI]
GO:0015079        [VIEW IN EMBL-EBI]
GO:0015085        [VIEW IN EMBL-EBI]
GO:0015267        [VIEW IN EMBL-EBI]
GO:0015276        [VIEW IN EMBL-EBI]
GO:0015318        [VIEW IN EMBL-EBI]
GO:0015672        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0022803        [VIEW IN EMBL-EBI]
GO:0022832        [VIEW IN EMBL-EBI]
GO:0022834        [VIEW IN EMBL-EBI]
GO:0022836        [VIEW IN EMBL-EBI]
GO:0022838        [VIEW IN EMBL-EBI]
GO:0022839        [VIEW IN EMBL-EBI]
GO:0022843        [VIEW IN EMBL-EBI]
GO:0022857        [VIEW IN EMBL-EBI]
GO:0022890        [VIEW IN EMBL-EBI]
GO:0030001        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0034220        [VIEW IN EMBL-EBI]
GO:0042391        [VIEW IN EMBL-EBI]
GO:0043855        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046873        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070588        [VIEW IN EMBL-EBI]
GO:0070838        [VIEW IN EMBL-EBI]
GO:0071804        [VIEW IN EMBL-EBI]
GO:0071805        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072511        [VIEW IN EMBL-EBI]
GO:0098655        [VIEW IN EMBL-EBI]
GO:0098660        [VIEW IN EMBL-EBI]
GO:0098662        [VIEW IN EMBL-EBI]
GO:0099094        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACTTTTGCTTCACTACCTTACCATTTCTGTAGAGCTAGTGATCGTGGACTTAGTCGTTCAAGCGTTATAGAGTTAGCAATCATGGCAGGCAAACCACAAACTTTTGTGAGCGTGGATGATCTGGACTTTAAGCTGCCATCATCATCATCTCTAACCCGCCAACACAACTACTCCTCAAGTATCAGTGGACCACTCCACCCCATTCAAGGAAGCCACAACACATCTGGATCCTTCAAGAAACGTTTCCAAAAAGGTTCCAAAGGACTTAAATCCATAGGCCGTTCGCTTGGTTTCGGTGTTTATAGAGCTGTCTTCCCTGAAGACCTCAAAGTATCCGAGAAGAAGATATTTGATCCTCAGGACAAAACTCTCTTGTTCTGCAATAAGCTGTTTGTTATCTCGTGTATTCTCTCGGTGTTCGTGGACCCTTTCTTCTTCTACCTTCCTGTGATCGATGGTGAGTCCAAGTGCCTCGGTATTGACCGGAAGCTTGCTATCACGGCGACTACGTTTAGGACTTTCATCGATGTGTTTTATCTCGCTCACATGGCTCTCCAGCTTAGGACTGCTTATATTGCACCCTCCTCCAGGGTCTTTGGGCGTGGTGAGCTTGTGATAGATCCTGCGCAGATAGCAAAGAGATATTTGCAGCGGTGGTTTATCATTGATTTCCTCTCTGTACTTCCTGTCCCTCAGATTGTAGTGTGGAGGTTCTTGCAAAGCTCAAGGGGATCAGATGTATTGGCTACAAAGCAGGCCTTGCTTTTCATTGTTTTGGTTCAGTATATACCGCGGTTTCTTCGTGTCTTGCCCTTGACATCAGAACTGAAAAGGACAGCAGGTGTCTTTGCAGAGACTGCTTGGGCTGGTGCTGCTTATTATCTGATGTTATATATGCTTGCAAGTCATATAGTTGGAGCGTTTTGGTACCTTTTAGCGTTAGAACGCAACGATGCCTGTTGGCAGGAGGCTTGTAGTGACGCAGGGAAGAAAATTTGCACAACAGGTTTCTTGTACTGTGGGAATCAAAACATGGACGGCTATGATGTTTGGAACAAGACCAAAGAAGCTGTTCTTGAGTCCAGGTGCCGCGCTGACCTCGATGATCCTAATCCTCCATTTGACTTTGGGATTTATACACAAGCTTTATCTTCTGGCATTGTCTCCTCTCAAAAGTTCATCACAAAGTATTGTTATTGCTTGTGGTGGGGCCTTCAGAACTTGAGTACACTTGGACAAGGGCTTGAAACCAGTACATACCCATTGGAGATTATGTTCTCCATCACTCTGGCCATCTCCGGGTTGATTCTCTTTGCTCTCCTCATCGGAAACATGCAGACATATCTCCAATCTCTTACCATCCGGCTGGAAGAAATGAGAGTGAAGAGGCGTGATTCAGAACAATGGATGCATCACAGGATGTTACCACAAGATCTTAGGCAGCGTGTGAGACGCTATGACCAGTATAAATGGCTGGAGACACGTGGTGTAGATGAAGAGTATCTCGTTCAGAATCTCCCCAAGGATCTCAGGAGAGACATCAAGCGCCATCTTTGTCTTGCTTTAGTGCGCAGGGTTCCATTGTTTGAGAGCATGGACGACAAGCTTCTTGATGCGATCTGCATGCGGCTAAAACCATGCTTGTTCACAGAGAGCACCTACTTAGTCCGAGAAGGAGACCCTGTAGACGAGATGCTATTCATCATACGTGGCCGCCTCGAGAGTGTGACAACAGATGGAGGCAGGAGCGGTTTCTTCAACTACAGTCTCCTCAAAGAAGGAGAGTTCTGCGGTGAAGAGCTTCTGACATGGGCACTGGATCCAAAATCAGGTGTGAACCTCCCGTCTTCCACCAGAACCGTGAAGGCTCTGACAGAGGTAGAGGCCTTTGCGCTGGCCTCAGAGGAGCTGAAGTTTGTAGCGAGCCAGTTCAGGCGTTTACATAGCAGGCAAGTGCAGCACACGTTCAGGTTTTACTCTCACCAGTGGAGGACTTGGGCTGCTTGCTTTATCCAGGCTGCATGGCGGAGATACTGCAAGAGGAAGAAGATGGAAGAGGCTGAGGCAGAGGCCGTGCCCATGTCAACCACTGGAAGTTCATCCTCCATGGGGGCTGCGTTTCTTGTCACGAAGTTTGCGGCTAGTGCGCTGCGCACCATACACAGGAACAGGAACACGAGGATTAGGGAATTGGTAAAGCTGCAGAAGCCTCCTGAGCCTGATTTCACTGCGGAAGATGCTGATTGA
Protein:  
MTFASLPYHFCRASDRGLSRSSVIELAIMAGKPQTFVSVDDLDFKLPSSSSLTRQHNYSSSISGPLHPIQGSHNTSGSFKKRFQKGSKGLKSIGRSLGFGVYRAVFPEDLKVSEKKIFDPQDKTLLFCNKLFVISCILSVFVDPFFFYLPVIDGESKCLGIDRKLAITATTFRTFIDVFYLAHMALQLRTAYIAPSSRVFGRGELVIDPAQIAKRYLQRWFIIDFLSVLPVPQIVVWRFLQSSRGSDVLATKQALLFIVLVQYIPRFLRVLPLTSELKRTAGVFAETAWAGAAYYLMLYMLASHIVGAFWYLLALERNDACWQEACSDAGKKICTTGFLYCGNQNMDGYDVWNKTKEAVLESRCRADLDDPNPPFDFGIYTQALSSGIVSSQKFITKYCYCLWWGLQNLSTLGQGLETSTYPLEIMFSITLAISGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPQDLRQRVRRYDQYKWLETRGVDEEYLVQNLPKDLRRDIKRHLCLALVRRVPLFESMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNYSLLKEGEFCGEELLTWALDPKSGVNLPSSTRTVKALTEVEAFALASEELKFVASQFRRLHSRQVQHTFRFYSHQWRTWAACFIQAAWRRYCKRKKMEEAEAEAVPMSTTGSSSSMGAAFLVTKFAASALRTIHRNRNTRIRELVKLQKPPEPDFTAEDAD